Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_0569Transmembrane protein. (141 aa)    
Predicted Functional Partners:
Lfee_0568
Putative aminoglycoside phosphotransferase.
       0.780
enhA_2
Enhanced entry protein EnhA.
  
     0.723
enhA_3
Enhanced entry protein EnhA.
  
     0.714
Lfee_2292
IcmJ protein.
  
     0.708
enhA_4
Enhanced entry protein EnhA.
  
     0.703
dotA
Defect in organelle trafficking protein DotA.
  
     0.698
spkB_3
Protein IcmE (DotG).
  
     0.697
Lfee_3143
Enhanced entry protein EnhA.
  
     0.696
arp
Ankyrin repeat domain-containing protein.
  
     0.691
Lfee_0570
Hypothetical protein.
 
     0.674
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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