STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lubXUBOX-containing protein. (250 aa)    
Predicted Functional Partners:
Lfee_0633
Protein SidH.
   
 
 0.921
Lfee_0404
Protein SidH.
    
 
 0.833
Lfee_0403
EPTP domain protein.
  
     0.674
Lfee_1201
Ankyrin repeat protein.
  
     0.636
Lfee_2490
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
     0.625
Lfee_0405
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.619
flaA
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
      
 0.618
Lfee_0830
Hypothetical protein.
  
     0.543
Lfee_0589
Hypothetical protein; Belongs to the UPF0235 family.
  
     0.532
tcmN
O-methyltransferase.
  
     0.520
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.