Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fimB_1Type 1 fimbriae regulatory protein FimB; Belongs to the 'phage' integrase family. (357 aa)    
Predicted Functional Partners:
xerC_1
Site specific recombinase; Belongs to the 'phage' integrase family.
 
     0.943
Lfee_0651
Hypothetical protein.
       0.774
xerC_2
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.760
fimB_2
Type 1 fimbriae regulatory protein FimB.
  
     0.736
comF
Competence protein ComF.
   
    0.577
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
  
  0.549
pta
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.534
Lfee_0974
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.517
ftsK
Cell division protein FtsK.
  
   
 0.502
recR
Recombinational DNA repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
   
 0.469
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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