STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yibHMultidrug resistance protein. (357 aa)    
Predicted Functional Partners:
oprM_1
Outer membrane efflux protein.
 
   0.945
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 
 0.861
Lfee_0733
Hypothetical protein.
       0.860
Lfee_0734
Phage minor tail protein.
       0.860
emrB_1
Multidrug resistance protein, MFS superfamily.
 
   0.781
Lfee_0736
Alpha-beta hydrolase family transporter esterase.
 
     0.670
tolC_2
Outer membrane protein TolC.
 
 
 0.603
mdtP_1
Outer membrane efflux lipoprotein.
  
   0.597
oprM_2
Outer membrane efflux protein.
  
   0.592
mdtP_2
Outer membrane efflux protein.
  
   0.589
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.