Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0752 | lpxK_1 | Lfee_0752 | Lfee_0753 | Hypothetical protein. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.800 |
| Lfee_0752 | msbA | Lfee_0752 | Lfee_0754 | Hypothetical protein. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.800 |
| Lfee_2374 | ccmA_2 | Lfee_2374 | Lfee_0874 | Acetyltransferase. | ABC transporter ATP binding protein. | 0.457 |
| Lfee_2374 | dnaK | Lfee_2374 | Lfee_2138 | Acetyltransferase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.658 |
| Lfee_2374 | ftsE | Lfee_2374 | Lfee_2680 | Acetyltransferase. | Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.457 |
| Lfee_2374 | msbA | Lfee_2374 | Lfee_0754 | Acetyltransferase. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.844 |
| SunT | hlyB_2 | Lfee_2778 | Lfee_2777 | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | ABC transporter. | 0.858 |
| SunT | msbA | Lfee_2778 | Lfee_0754 | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.759 |
| apxIB | msbA | Lfee_3132 | Lfee_0754 | Toxin secretion ATP binding protein. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.732 |
| ccmA_2 | Lfee_2374 | Lfee_0874 | Lfee_2374 | ABC transporter ATP binding protein. | Acetyltransferase. | 0.457 |
| ccmA_2 | msbA | Lfee_0874 | Lfee_0754 | ABC transporter ATP binding protein. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.758 |
| dnaK | Lfee_2374 | Lfee_2138 | Lfee_2374 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Acetyltransferase. | 0.658 |
| dnaK | hlyB_2 | Lfee_2138 | Lfee_2777 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ABC transporter. | 0.414 |
| dnaK | msbA | Lfee_2138 | Lfee_0754 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.732 |
| ftsE | Lfee_2374 | Lfee_2680 | Lfee_2374 | Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Acetyltransferase. | 0.457 |
| ftsE | msbA | Lfee_2680 | Lfee_0754 | Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.724 |
| hlyB_1 | msbA | Lfee_2221 | Lfee_0754 | ABC transporter. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.754 |
| hlyB_2 | SunT | Lfee_2777 | Lfee_2778 | ABC transporter. | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | 0.858 |
| hlyB_2 | dnaK | Lfee_2777 | Lfee_2138 | ABC transporter. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.414 |
| hlyB_2 | msbA | Lfee_2777 | Lfee_0754 | ABC transporter. | ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.774 |
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