Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0776 | metI | Lfee_0776 | Lfee_0778 | Hypothetical protein. | ABC-type metal ion transport system, permease component. | 0.566 |
| Lfee_0776 | metN | Lfee_0776 | Lfee_0777 | Hypothetical protein. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.566 |
| Lfee_1289 | SunT | Lfee_1289 | Lfee_2778 | Fused transporter subunits of ABC superfamily: ATP-binding component. | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | 0.748 |
| Lfee_1289 | metN | Lfee_1289 | Lfee_0777 | Fused transporter subunits of ABC superfamily: ATP-binding component. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.899 |
| Lfee_1990 | metN | Lfee_1990 | Lfee_0777 | ABC transporter permease. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.825 |
| SunT | Lfee_1289 | Lfee_2778 | Lfee_1289 | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | Fused transporter subunits of ABC superfamily: ATP-binding component. | 0.748 |
| SunT | metN | Lfee_2778 | Lfee_0777 | Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.836 |
| cysK | metB | Lfee_1728 | Lfee_0190 | Cystathionine beta synthase. | Cystathionine beta-lyase. | 0.988 |
| cysK | metK | Lfee_1728 | Lfee_2135 | Cystathionine beta synthase. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.402 |
| cysK | metN | Lfee_1728 | Lfee_0777 | Cystathionine beta synthase. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.651 |
| cysK | ycgE | Lfee_1728 | Lfee_1378 | Cystathionine beta synthase. | HTH-type transcriptional repressor YcgE. | 0.723 |
| metB | cysK | Lfee_0190 | Lfee_1728 | Cystathionine beta-lyase. | Cystathionine beta synthase. | 0.988 |
| metB | metK | Lfee_0190 | Lfee_2135 | Cystathionine beta-lyase. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.746 |
| metB | metN | Lfee_0190 | Lfee_0777 | Cystathionine beta-lyase. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.688 |
| metB | ycgE | Lfee_0190 | Lfee_1378 | Cystathionine beta-lyase. | HTH-type transcriptional repressor YcgE. | 0.777 |
| metI | Lfee_0776 | Lfee_0778 | Lfee_0776 | ABC-type metal ion transport system, permease component. | Hypothetical protein. | 0.566 |
| metI | metN | Lfee_0778 | Lfee_0777 | ABC-type metal ion transport system, permease component. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| metI | nlpA | Lfee_0778 | Lfee_0779 | ABC-type metal ion transport system, permease component. | 29 kDa immunogenic protein. | 0.999 |
| metK | cysK | Lfee_2135 | Lfee_1728 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Cystathionine beta synthase. | 0.402 |
| metK | metB | Lfee_2135 | Lfee_0190 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Cystathionine beta-lyase. | 0.746 |
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