Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0164 | Lfee_0841 | Lfee_0164 | Lfee_0841 | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.769 |
| Lfee_0164 | coxB | Lfee_0164 | Lfee_0287 | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.445 |
| Lfee_0164 | dprE1_1 | Lfee_0164 | Lfee_0842 | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.911 |
| Lfee_0841 | Lfee_0164 | Lfee_0841 | Lfee_0164 | Hypothetical protein. | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | 0.769 |
| Lfee_0841 | dprE1_1 | Lfee_0841 | Lfee_0842 | Hypothetical protein. | Hypothetical protein. | 0.952 |
| coxB | Lfee_0164 | Lfee_0287 | Lfee_0164 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | 0.445 |
| coxB | cycA | Lfee_0287 | Lfee_0286 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c. | 0.977 |
| coxB | dprE1_1 | Lfee_0287 | Lfee_0842 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein. | 0.728 |
| coxB | etfA | Lfee_0287 | Lfee_2623 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Electron transfer flavoprotein subunit alpha. | 0.406 |
| coxB | korA | Lfee_0287 | Lfee_2569 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.826 |
| coxB | ndoR | Lfee_0287 | Lfee_2855 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Xylene monooxygenase. | 0.792 |
| coxB | pdhB_2 | Lfee_0287 | Lfee_1854 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.809 |
| cycA | coxB | Lfee_0286 | Lfee_0287 | Cytochrome c. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.977 |
| cycA | dprE1_1 | Lfee_0286 | Lfee_0842 | Cytochrome c. | Hypothetical protein. | 0.670 |
| cycA | korA | Lfee_0286 | Lfee_2569 | Cytochrome c. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.747 |
| cycA | ndoR | Lfee_0286 | Lfee_2855 | Cytochrome c. | Xylene monooxygenase. | 0.786 |
| cycA | pdhB_2 | Lfee_0286 | Lfee_1854 | Cytochrome c. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.710 |
| dprE1_1 | Lfee_0164 | Lfee_0842 | Lfee_0164 | Hypothetical protein. | Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. | 0.911 |
| dprE1_1 | Lfee_0841 | Lfee_0842 | Lfee_0841 | Hypothetical protein. | Hypothetical protein. | 0.952 |
| dprE1_1 | coxB | Lfee_0842 | Lfee_0287 | Hypothetical protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.728 |
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