Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_0576 | Lfee_0864 | Lfee_0576 | Lfee_0864 | HTH-type transcriptional regulator. | Hypothetical protein. | 0.789 |
Lfee_0864 | Lfee_0576 | Lfee_0864 | Lfee_0576 | Hypothetical protein. | HTH-type transcriptional regulator. | 0.789 |
Lfee_0864 | Lfee_1696 | Lfee_0864 | Lfee_1696 | Hypothetical protein. | HTH-type transcriptional regulator. | 0.789 |
Lfee_0864 | Lfee_2512 | Lfee_0864 | Lfee_2512 | Hypothetical protein. | Peptidase, S24 family. | 0.789 |
Lfee_0864 | higA | Lfee_0864 | Lfee_0863 | Hypothetical protein. | Antitoxin HigA. | 0.952 |
Lfee_0864 | hipB_1-2 | Lfee_0864 | Lfee_1355 | Hypothetical protein. | Putative DNA-binding transcriptional regulator. | 0.768 |
Lfee_1696 | Lfee_0864 | Lfee_1696 | Lfee_0864 | HTH-type transcriptional regulator. | Hypothetical protein. | 0.789 |
Lfee_2512 | Lfee_0864 | Lfee_2512 | Lfee_0864 | Peptidase, S24 family. | Hypothetical protein. | 0.789 |
higA | Lfee_0864 | Lfee_0863 | Lfee_0864 | Antitoxin HigA. | Hypothetical protein. | 0.952 |
hipB_1-2 | Lfee_0864 | Lfee_1355 | Lfee_0864 | Putative DNA-binding transcriptional regulator. | Hypothetical protein. | 0.768 |