STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dinJAntitoxin DinJ. (86 aa)    
Predicted Functional Partners:
yafQ
mRNA interferase YafQ.
 
 
 0.996
parE1
Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family.
   
   0.794
relG
Toxin RelG.
 
 
 0.738
relE
mRNA interferase RelE.
  
 
 0.653
Lfee_1009
Hypothetical protein.
       0.615
Lfee_1515
Hypothetical protein.
   
   0.462
munIC_2
Regulatory protein munI (modular protein).
  
    0.432
Lfee_1010
Hypothetical protein.
       0.419
Lfee_1011
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
       0.412
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.