Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_1043 | rpe | Lfee_1043 | Lfee_1041 | Opacity protein-like surface antigen. | D-ribulose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.611 |
| Lfee_1043 | slt | Lfee_1043 | Lfee_1040 | Opacity protein-like surface antigen. | Soluble lytic murein transglycosylase. | 0.538 |
| Lfee_1043 | spkB_3 | Lfee_1043 | Lfee_2296 | Opacity protein-like surface antigen. | Protein IcmE (DotG). | 0.616 |
| amiB | slt | Lfee_2709 | Lfee_1040 | N-acetylmuramoyl-L-alanine amidase. | Soluble lytic murein transglycosylase. | 0.690 |
| amiB | spkB_3 | Lfee_2709 | Lfee_2296 | N-acetylmuramoyl-L-alanine amidase. | Protein IcmE (DotG). | 0.963 |
| flgE | fliD | Lfee_1473 | Lfee_3145 | Flagellar hook protein FlgE. | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.981 |
| flgE | fliE | Lfee_1473 | Lfee_3031 | Flagellar hook protein FlgE. | Flagellar hook-basal body complex protein. | 0.991 |
| flgE | fliI | Lfee_1473 | Lfee_3027 | Flagellar hook protein FlgE. | Nucleotide binding protein FliI. | 0.968 |
| flgE | fliM | Lfee_1473 | Lfee_0843 | Flagellar hook protein FlgE. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.986 |
| flgE | slt | Lfee_1473 | Lfee_1040 | Flagellar hook protein FlgE. | Soluble lytic murein transglycosylase. | 0.549 |
| fliD | flgE | Lfee_3145 | Lfee_1473 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook protein FlgE. | 0.981 |
| fliD | fliE | Lfee_3145 | Lfee_3031 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-basal body complex protein. | 0.976 |
| fliD | fliI | Lfee_3145 | Lfee_3027 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Nucleotide binding protein FliI. | 0.964 |
| fliD | fliM | Lfee_3145 | Lfee_0843 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.978 |
| fliD | slt | Lfee_3145 | Lfee_1040 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Soluble lytic murein transglycosylase. | 0.611 |
| fliE | flgE | Lfee_3031 | Lfee_1473 | Flagellar hook-basal body complex protein. | Flagellar hook protein FlgE. | 0.991 |
| fliE | fliD | Lfee_3031 | Lfee_3145 | Flagellar hook-basal body complex protein. | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.976 |
| fliE | fliI | Lfee_3031 | Lfee_3027 | Flagellar hook-basal body complex protein. | Nucleotide binding protein FliI. | 0.963 |
| fliE | fliM | Lfee_3031 | Lfee_0843 | Flagellar hook-basal body complex protein. | Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.976 |
| fliE | slt | Lfee_3031 | Lfee_1040 | Flagellar hook-basal body complex protein. | Soluble lytic murein transglycosylase. | 0.600 |
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