Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_1056 | Lfee_1057 | Lfee_1056 | Lfee_1057 | Hypothetical protein. | Glutamate synthetase. | 0.614 |
Lfee_1056 | lipA | Lfee_1056 | Lfee_1059 | Hypothetical protein. | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.462 |
Lfee_1056 | pleD_2 | Lfee_1056 | Lfee_1058 | Hypothetical protein. | GGDEF domain-containing protein. | 0.595 |
Lfee_1057 | Lfee_1056 | Lfee_1057 | Lfee_1056 | Glutamate synthetase. | Hypothetical protein. | 0.614 |
Lfee_1057 | Lfee_1304 | Lfee_1057 | Lfee_1304 | Glutamate synthetase. | Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | 0.652 |
Lfee_1057 | cpsB | Lfee_1057 | Lfee_1078 | Glutamate synthetase. | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.649 |
Lfee_1057 | lipA | Lfee_1057 | Lfee_1059 | Glutamate synthetase. | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.570 |
Lfee_1057 | manC | Lfee_1057 | Lfee_1223 | Glutamate synthetase. | Mannose-6-phosphate isomerase. | 0.603 |
Lfee_1057 | metG | Lfee_1057 | Lfee_0301 | Glutamate synthetase. | Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.695 |
Lfee_1057 | motA2 | Lfee_1057 | Lfee_2057 | Glutamate synthetase. | Flagellar motor protein MotA. | 0.564 |
Lfee_1057 | motC | Lfee_1057 | Lfee_0854 | Glutamate synthetase. | Flagellar motor protein. | 0.564 |
Lfee_1057 | pleD_2 | Lfee_1057 | Lfee_1058 | Glutamate synthetase. | GGDEF domain-containing protein. | 0.749 |
Lfee_1057 | purB | Lfee_1057 | Lfee_2894 | Glutamate synthetase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.618 |
Lfee_1304 | Lfee_1057 | Lfee_1304 | Lfee_1057 | Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Glutamate synthetase. | 0.652 |
Lfee_1304 | purB | Lfee_1304 | Lfee_2894 | Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.769 |
cpsB | Lfee_1057 | Lfee_1078 | Lfee_1057 | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glutamate synthetase. | 0.649 |
cpsB | manC | Lfee_1078 | Lfee_1223 | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Mannose-6-phosphate isomerase. | 0.432 |
cpsB | metG | Lfee_1078 | Lfee_0301 | Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.574 |
lipA | Lfee_1056 | Lfee_1059 | Lfee_1056 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Hypothetical protein. | 0.462 |
lipA | Lfee_1057 | Lfee_1059 | Lfee_1057 | Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | Glutamate synthetase. | 0.570 |
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