STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1064Chain length determinant protein. (349 aa)    
Predicted Functional Partners:
neuC
N-acylglucosamine 2-epimerase.
  
  
 0.826
Lfee_1063
Polysaccharide biosynthesis protein.
  
  
 0.666
yvfE
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.619
spsE
N-acetylneuraminic acid synthetase.
  
    0.543
neuA
CMP-N-acetlyneuraminic acid synthetase.
       0.535
strE
NAD dependent epimerase/dehydratase family protein.
  
    0.512
rmlA
Glucose-1-phosphate thymidylyltransferase.
       0.512
dapH
Chloramphenicol acetyltransferase.
       0.501
Lfee_1062
Glycosyltransferase.
       0.444
galE_1
NAD dependent epimerase/dehydratase.
  
    0.411
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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