STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtpB_2Hypothetical protein. (500 aa)    
Predicted Functional Partners:
iraA_1
Small-molecule methyltransferase IraA.
     
 0.801
Lfee_2162
Zip family transporter.
  
 
   0.569
Lfee_0172
Amino acid permease.
  
     0.534
proA_2
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
   
 0.495
lly
4-hydroxyphenylpyruvate dioxygenase.
     
 0.441
wecA
alpha-N-acetylglucosaminyltransferase.
       0.435
yveA_1
Amino acid transport protein.
  
 
   0.434
yveA
Aspartate-proton symporter.
  
 
   0.430
Lfee_2699
Protein-tyrosine phosphatase.
  
     0.413
gadC_2
Amino acid antiporter.
  
 
   0.409
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.