STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hddAD-glycero-alpha-D-manno-heptose 7-phosphate kinase. (326 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase.
 
 
 0.984
tal
Transaldolase.
 
  
  0.947
gmhB
D,D-heptose 1,7-bisphosphate phosphatase.
 
 
 0.945
yraO
DnaA initiator-associating factor for replication initiation.
 
 0.910
rfbF
Nucleotidyltransferase.
 
 
 0.860
hisB
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
  
 
 0.788
Lfee_1103
Hypothetical protein.
       0.776
galE_1-2
NAD dependent epimerase/dehydratase family protein.
 
 
 0.741
rmlA1
Mannose-1-phosphate guanyltransferase.
 
 
 0.606
tdh
Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
    
  0.542
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.