Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lfee_1135Glyoxalase/bleomycin resistance protein. (127 aa)    
Predicted Functional Partners:
pheA_1
P-protein.
     
  0.695
pheA_2
Prephenate dehydratase.
     
  0.695
Lfee_1483
BioY family protein.
  
     0.513
Lfee_1136
Hypothetical protein.
       0.505
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
    
  0.463
tdcG
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.461
Lfee_1212
Amine oxidase.
     
  0.461
ytbE
D-xylose reductase III.
     
  0.461
phhA
Phenylalanine-4-hydroxylase.
     
  0.461
katG
Catalase/(hydro)peroxidase KatG; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
  0.461
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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