Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_0974 | Lfee_0991 | Lfee_0974 | Lfee_0991 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine cyclodeaminase. | 0.816 |
| Lfee_0974 | Lfee_1209 | Lfee_0974 | Lfee_1209 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine cyclodeaminase. | 0.816 |
| Lfee_0974 | Lfee_2003 | Lfee_0974 | Lfee_2003 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Aspartate aminotransferase. | 0.799 |
| Lfee_0974 | alr | Lfee_0974 | Lfee_1050 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.469 |
| Lfee_0974 | argD | Lfee_0974 | Lfee_1750 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.826 |
| Lfee_0974 | cysK | Lfee_0974 | Lfee_1728 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Cystathionine beta synthase. | 0.406 |
| Lfee_0974 | hutG | Lfee_0974 | Lfee_0081 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.830 |
| Lfee_0974 | lysAC_1 | Lfee_0974 | Lfee_0474 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.411 |
| Lfee_0974 | proC | Lfee_0974 | Lfee_2281 | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.841 |
| Lfee_0991 | Lfee_0974 | Lfee_0991 | Lfee_0974 | Ornithine cyclodeaminase. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.816 |
| Lfee_0991 | Lfee_1209 | Lfee_0991 | Lfee_1209 | Ornithine cyclodeaminase. | Ornithine cyclodeaminase. | 0.646 |
| Lfee_0991 | Lfee_2003 | Lfee_0991 | Lfee_2003 | Ornithine cyclodeaminase. | Aspartate aminotransferase. | 0.570 |
| Lfee_0991 | alr | Lfee_0991 | Lfee_1050 | Ornithine cyclodeaminase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.565 |
| Lfee_0991 | argD | Lfee_0991 | Lfee_1750 | Ornithine cyclodeaminase. | Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.548 |
| Lfee_0991 | cysK | Lfee_0991 | Lfee_1728 | Ornithine cyclodeaminase. | Cystathionine beta synthase. | 0.676 |
| Lfee_0991 | hutG | Lfee_0991 | Lfee_0081 | Ornithine cyclodeaminase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.569 |
| Lfee_0991 | lysAC_1 | Lfee_0991 | Lfee_0474 | Ornithine cyclodeaminase. | Diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and lysC); Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.572 |
| Lfee_0991 | proC | Lfee_0991 | Lfee_2281 | Ornithine cyclodeaminase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.603 |
| Lfee_1209 | Lfee_0974 | Lfee_1209 | Lfee_0974 | Ornithine cyclodeaminase. | Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.816 |
| Lfee_1209 | Lfee_0991 | Lfee_1209 | Lfee_0991 | Ornithine cyclodeaminase. | Ornithine cyclodeaminase. | 0.646 |
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