Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_1275 | Lfee_2668 | Lfee_1275 | Lfee_2668 | Hypothetical protein. | Mevalonate diphosphate decarboxylase. | 0.903 |
| Lfee_1275 | fni | Lfee_1275 | Lfee_1273 | Hypothetical protein. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.861 |
| Lfee_1275 | mvaA | Lfee_1275 | Lfee_1274 | Hypothetical protein. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.876 |
| Lfee_2176 | Lfee_2668 | Lfee_2176 | Lfee_2668 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Mevalonate diphosphate decarboxylase. | 0.699 |
| Lfee_2176 | fni | Lfee_2176 | Lfee_1273 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.629 |
| Lfee_2176 | guaA | Lfee_2176 | Lfee_0955 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.438 |
| Lfee_2176 | ispB | Lfee_2176 | Lfee_2188 | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.806 |
| Lfee_2668 | Lfee_1275 | Lfee_2668 | Lfee_1275 | Mevalonate diphosphate decarboxylase. | Hypothetical protein. | 0.903 |
| Lfee_2668 | Lfee_2176 | Lfee_2668 | Lfee_2176 | Mevalonate diphosphate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.699 |
| Lfee_2668 | Lfee_2669 | Lfee_2668 | Lfee_2669 | Mevalonate diphosphate decarboxylase. | Putative mevalonate kinase. | 0.994 |
| Lfee_2668 | fni | Lfee_2668 | Lfee_1273 | Mevalonate diphosphate decarboxylase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.927 |
| Lfee_2668 | ispB | Lfee_2668 | Lfee_2188 | Mevalonate diphosphate decarboxylase. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.699 |
| Lfee_2668 | mvaA | Lfee_2668 | Lfee_1274 | Mevalonate diphosphate decarboxylase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.896 |
| Lfee_2669 | Lfee_2668 | Lfee_2669 | Lfee_2668 | Putative mevalonate kinase. | Mevalonate diphosphate decarboxylase. | 0.994 |
| Lfee_2669 | fni | Lfee_2669 | Lfee_1273 | Putative mevalonate kinase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.850 |
| Lfee_2669 | mvaA | Lfee_2669 | Lfee_1274 | Putative mevalonate kinase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.918 |
| fni | Lfee_1275 | Lfee_1273 | Lfee_1275 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Hypothetical protein. | 0.861 |
| fni | Lfee_2176 | Lfee_1273 | Lfee_2176 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.629 |
| fni | Lfee_2668 | Lfee_1273 | Lfee_2668 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate diphosphate decarboxylase. | 0.927 |
| fni | Lfee_2669 | Lfee_1273 | Lfee_2669 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Putative mevalonate kinase. | 0.850 |
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