STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpBFAD dependent oxidoreductase. (535 aa)    
Predicted Functional Partners:
ndoR
Xylene monooxygenase.
  
  
 0.812
pksJ
Polyketide synthase module.
  
 0.631
ndoA
Naphthalene 1,2-dioxygenase system ferredoxin subunit.
  
  
 0.598
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
 0.551
Lfee_1309
GNAT family acetyltransferase.
       0.547
Lfee_0013
Oxidoreductase.
  
   
 0.536
tycC_2
Peptide synthetase, non-ribosomal.
 
 
 0.515
Lfee_1292
Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
     
 0.498
egtC
Glutamine amidotransferase.
  
     0.469
Lfee_0445
protein-L-isoaspartate-O-methyltransferase.
    
 0.462
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.