STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1379Hypothetical protein. (197 aa)    
Predicted Functional Partners:
Lfee_0020
Hypothetical protein.
 
  
 0.805
ycgE
HTH-type transcriptional repressor YcgE.
       0.790
budC
Polysaccharide biosynthesis dehydrogenase/reductase.
 
    0.767
pds
Flavin containing amine oxidoreductase.
 
   
 0.763
Lfee_1377
Fatty acid desaturase.
       0.752
Lfee_0015
Deoxyribodipyrimidine photolyase-related protein.
 
     0.628
Lfee_1380
Cytochrome D ubiquinol oxidase subunit I.
       0.508
qxtB
Cytochrome d ubiquinol oxidase subunit II.
       0.508
cfa_1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.414
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.