Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_1399 | Lfee_1552 | Lfee_1399 | Lfee_1552 | Hypothetical protein. | Hypothetical protein. | 0.756 |
Lfee_1399 | Lfee_1690 | Lfee_1399 | Lfee_1690 | Hypothetical protein. | Sporulation related domain protein. | 0.674 |
Lfee_1399 | cocE | Lfee_1399 | Lfee_1400 | Hypothetical protein. | Cocaine esterase. | 0.497 |
Lfee_1399 | hss | Lfee_1399 | Lfee_1560 | Hypothetical protein. | Homospermidine synthase. | 0.464 |
Lfee_1399 | mutX | Lfee_1399 | Lfee_1037 | Hypothetical protein. | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | 0.461 |
Lfee_1399 | skp | Lfee_1399 | Lfee_2204 | Hypothetical protein. | Outer membrane protein OmpH; Belongs to the skp family. | 0.520 |
Lfee_1552 | Lfee_1399 | Lfee_1552 | Lfee_1399 | Hypothetical protein. | Hypothetical protein. | 0.756 |
Lfee_1552 | Lfee_1690 | Lfee_1552 | Lfee_1690 | Hypothetical protein. | Sporulation related domain protein. | 0.532 |
Lfee_1552 | hss | Lfee_1552 | Lfee_1560 | Hypothetical protein. | Homospermidine synthase. | 0.575 |
Lfee_1552 | mutX | Lfee_1552 | Lfee_1037 | Hypothetical protein. | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | 0.521 |
Lfee_1552 | skp | Lfee_1552 | Lfee_2204 | Hypothetical protein. | Outer membrane protein OmpH; Belongs to the skp family. | 0.520 |
Lfee_1690 | Lfee_1399 | Lfee_1690 | Lfee_1399 | Sporulation related domain protein. | Hypothetical protein. | 0.674 |
Lfee_1690 | Lfee_1552 | Lfee_1690 | Lfee_1552 | Sporulation related domain protein. | Hypothetical protein. | 0.532 |
Lfee_1690 | hss | Lfee_1690 | Lfee_1560 | Sporulation related domain protein. | Homospermidine synthase. | 0.437 |
cocE | Lfee_1399 | Lfee_1400 | Lfee_1399 | Cocaine esterase. | Hypothetical protein. | 0.497 |
hss | Lfee_1399 | Lfee_1560 | Lfee_1399 | Homospermidine synthase. | Hypothetical protein. | 0.464 |
hss | Lfee_1552 | Lfee_1560 | Lfee_1552 | Homospermidine synthase. | Hypothetical protein. | 0.575 |
hss | Lfee_1690 | Lfee_1560 | Lfee_1690 | Homospermidine synthase. | Sporulation related domain protein. | 0.437 |
mutX | Lfee_1399 | Lfee_1037 | Lfee_1399 | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.461 |
mutX | Lfee_1552 | Lfee_1037 | Lfee_1552 | MutT/nudix family protein; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.521 |
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