Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_1454 | Lfee_1456 | Lfee_1454 | Lfee_1456 | Hypothetical protein. | Hypothetical protein. | 0.592 |
Lfee_1454 | bolA | Lfee_1454 | Lfee_1455 | Hypothetical protein. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.592 |
Lfee_1454 | pilE1 | Lfee_1454 | Lfee_1453 | Hypothetical protein. | Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family. | 0.514 |
Lfee_1456 | Lfee_1454 | Lfee_1456 | Lfee_1454 | Hypothetical protein. | Hypothetical protein. | 0.592 |
Lfee_1456 | bolA | Lfee_1456 | Lfee_1455 | Hypothetical protein. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.800 |
Lfee_1456 | pilE1 | Lfee_1456 | Lfee_1453 | Hypothetical protein. | Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family. | 0.475 |
birA | bolA | Lfee_1087 | Lfee_1455 | biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.406 |
bolA | Lfee_1454 | Lfee_1455 | Lfee_1454 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Hypothetical protein. | 0.592 |
bolA | Lfee_1456 | Lfee_1455 | Lfee_1456 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Hypothetical protein. | 0.800 |
bolA | birA | Lfee_1455 | Lfee_1087 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.406 |
bolA | dps | Lfee_1455 | Lfee_0463 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | DNA binding stress protein; Belongs to the Dps family. | 0.541 |
bolA | grlA | Lfee_1455 | Lfee_1748 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.980 |
bolA | ndoR | Lfee_1455 | Lfee_2855 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Xylene monooxygenase. | 0.430 |
bolA | pilE1 | Lfee_1455 | Lfee_1453 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family. | 0.478 |
bolA | purQ | Lfee_1455 | Lfee_2747 | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | Phosphoribosylformylglycinamidine synthase I (FGAM synthase I); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is t [...] | 0.436 |
dps | bolA | Lfee_0463 | Lfee_1455 | DNA binding stress protein; Belongs to the Dps family. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.541 |
grlA | bolA | Lfee_1748 | Lfee_1455 | Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.980 |
grlA | ndoR | Lfee_1748 | Lfee_2855 | Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Xylene monooxygenase. | 0.404 |
ndoR | bolA | Lfee_2855 | Lfee_1455 | Xylene monooxygenase. | Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family. | 0.430 |
ndoR | grlA | Lfee_2855 | Lfee_1748 | Xylene monooxygenase. | Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.404 |
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