STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kshARieske 2Fe-2S domain protein. (332 aa)    
Predicted Functional Partners:
ndoR
Xylene monooxygenase.
  
 
 0.922
Lfee_1587
Coenzyme F390 synthetase FtsA.
 
    0.842
Lfee_1585
Hypothetical protein.
 
     0.835
carB_2
Carbamoyl-phosphate synthase large chain.
 
     0.827
ahlD
Zn-dependent hydrolase GumP.
       0.805
fadH
2,4-dienoyl-CoA reductase FadH1.
    
  0.792
fabH_2
3-oxoacyl-ACP synthase.
       0.778
Lfee_1589
3-beta hydroxysteroid dehydrogenase/isomerase.
       0.774
ndoA
Naphthalene 1,2-dioxygenase system ferredoxin subunit.
 
  
 0.667
fpr
Phenol hydroxylase.
  
 
 0.585
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.