STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1609Transmembrane protein. (144 aa)    
Predicted Functional Partners:
Lfee_1608
Transmembrane protein.
 
     0.940
dapH
Chloramphenicol acetyltransferase.
   
    0.802
cloSI
Clostripain precursor.
 
    0.554
Lfee_0138
Hypothetical protein.
   
 
  0.466
rtxA
Hypothetical protein.
   
 
  0.456
Lfee_1238
Hypothetical protein.
   
 
  0.456
Lfee_2351
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.450
Lfee_2352
Hypothetical protein.
   
    0.450
Lfee_3240
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
 
 0.450
ndoR
Xylene monooxygenase.
  
     0.448
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.