STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
degPDegP protease (Do-like, S2-serine-like). (540 aa)    
Predicted Functional Partners:
htrA_2
DegP protease.
  
     0.578
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
  0.499
Lfee_1617
Hypothetical protein.
       0.482
Lfee_2490
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
 
  0.463
ctpA
Carboxy-terminal protease; Belongs to the peptidase S41A family.
 
  
 0.441
arcB_1
Sensory box histidine kinase/response regulator.
  
  
 0.429
Lfee_1930
Ankyrin repeat-containing protein.
  
 
  0.424
Lfee_2486
Ankyrin repeat-containing protein.
  
 
  0.410
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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