STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysRLysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (283 aa)    
Predicted Functional Partners:
Lfee_1638
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.706
Lfee_1633
Multidrug efflux protein, outer membrane component.
 
     0.699
nuoL_1
NADH-ubiquinone oxidoreductase chain 5.
 
     0.689
lagD
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
 
     0.686
Lfee_1634
RND efflux membrane fusion protein.
       0.645
Lfee_1640
Hypothetical protein.
 
     0.637
dmlR_2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.631
Lfee_1639
Nitrogen regulatory protein P-II.
 
    0.619
oxyR
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.505
Lfee_0742
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.491
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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