STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1639Nitrogen regulatory protein P-II. (121 aa)    
Predicted Functional Partners:
Lfee_1638
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.929
Lfee_1640
Hypothetical protein.
 
     0.864
yrrB
Methyltransferase.
    
 
 0.817
Lfee_0330
Hypothetical protein.
    
 
 0.806
Lfee_0331
TPR repeat containing protein.
    
 
 0.806
Lfee_1678
Methyltransferase.
    
 
 0.806
glnD
protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
   
 0.799
nuoL_1
NADH-ubiquinone oxidoreductase chain 5.
 
     0.784
arcB_3
Sensory box histidine kinase/response regulator.
     
 0.710
Lfee_0012
Hypothetical protein.
  
     0.678
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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