Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_1660 | emrA_1 | Lfee_1660 | Lfee_1662 | Hypothetical protein. | Multidrug efflux system. | 0.461 |
Lfee_1660 | emrB | Lfee_1660 | Lfee_1661 | Hypothetical protein. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.461 |
Lfee_1660 | mdtP_2 | Lfee_1660 | Lfee_1663 | Hypothetical protein. | Outer membrane efflux protein. | 0.418 |
Lfee_2374 | emrB | Lfee_2374 | Lfee_1661 | Acetyltransferase. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.696 |
Lfee_2374 | pheA_1 | Lfee_2374 | Lfee_1459 | Acetyltransferase. | P-protein. | 0.507 |
Lfee_2374 | pksJ | Lfee_2374 | Lfee_0647 | Acetyltransferase. | Polyketide synthase module. | 0.999 |
emrA_1 | Lfee_1660 | Lfee_1662 | Lfee_1660 | Multidrug efflux system. | Hypothetical protein. | 0.461 |
emrA_1 | emrB | Lfee_1662 | Lfee_1661 | Multidrug efflux system. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.985 |
emrA_1 | mdtP_1 | Lfee_1662 | Lfee_2371 | Multidrug efflux system. | Outer membrane efflux lipoprotein. | 0.881 |
emrA_1 | mdtP_2 | Lfee_1662 | Lfee_1663 | Multidrug efflux system. | Outer membrane efflux protein. | 0.970 |
emrA_2 | emrB | Lfee_2372 | Lfee_1661 | Multidrug efflux system. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.935 |
emrA_2 | mdtP_1 | Lfee_2372 | Lfee_2371 | Multidrug efflux system. | Outer membrane efflux lipoprotein. | 0.976 |
emrA_2 | mdtP_2 | Lfee_2372 | Lfee_1663 | Multidrug efflux system. | Outer membrane efflux protein. | 0.876 |
emrA_2-2 | emrB | Lfee_1407 | Lfee_1661 | Hemolysin D. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.792 |
emrA_2-2 | mdtP_1 | Lfee_1407 | Lfee_2371 | Hemolysin D. | Outer membrane efflux lipoprotein. | 0.667 |
emrA_2-2 | mdtP_2 | Lfee_1407 | Lfee_1663 | Hemolysin D. | Outer membrane efflux protein. | 0.687 |
emrB | Lfee_1660 | Lfee_1661 | Lfee_1660 | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.461 |
emrB | Lfee_2374 | Lfee_1661 | Lfee_2374 | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | Acetyltransferase. | 0.696 |
emrB | emrA_1 | Lfee_1661 | Lfee_1662 | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | Multidrug efflux system. | 0.985 |
emrB | emrA_2 | Lfee_1661 | Lfee_2372 | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | Multidrug efflux system. | 0.935 |
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