STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abcT3ABC transporter ATP binding protein. (437 aa)    
Predicted Functional Partners:
proW
ABC transporter permease.
 
   
 0.978
Lfee_1862
Thiamine biosynthesis protein NMT-1.
  
 0.976
Lfee_2006
Carbon starvation induced protein.
  
 
 0.602
yieF
Chromate reductase, Class I, flavoprotein.
  
 
 0.598
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
    
  0.478
ugpA
Sn-glycerol-3-phosphate transmembrane ABC transporter.
    
  0.463
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
    
  0.463
potD
Spermidine/putrescine-binding periplasmic protein PotD; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
    
  0.452
ugpC
Sn-glycerol-3-phosphate transport, ATP binding protein; Belongs to the ABC transporter superfamily.
     
  0.436
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
  0.417
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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