STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcT3ABC transporter ATP binding protein. (437 aa)    
Predicted Functional Partners:
proW
ABC transporter permease.
 
   
 0.972
Lfee_1862
Thiamine biosynthesis protein NMT-1.
  
 
 0.952
Lfee_2006
Carbon starvation induced protein.
  
 
  0.673
yieF
Chromate reductase, Class I, flavoprotein.
  
 
 0.649
ugpC
Sn-glycerol-3-phosphate transport, ATP binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.574
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
    
  0.532
ugpA
Sn-glycerol-3-phosphate transmembrane ABC transporter.
    
  0.523
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
   
  0.520
uhpC_2
Major facilitator family transporter.
 
   
 0.479
Lfee_0804
Phosphoadenosine phosphosulfate reductase family protein.
  
 
 0.460
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.