Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
qmcAProtease. (265 aa)    
Predicted Functional Partners:
Lfee_1739
Transmembrane protein.
 
    0.977
ftsH
Cell division protease ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.808
gloA
Lactoylglutathione lyase.
  
    0.775
Lfee_1741
Coiled-coil protein.
       0.718
hflK
Protease subunit HflK; HflC and HflK could encode or regulate a protease.
  
   
 0.543
dcd
Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
       0.489
Lfee_2683
Zinc protease (peptidase, M16 family).
  
  0.463
Lfee_0543
Putative rhomboid family protein.
    
 0.452
ptrA
Zinc protease.
   
  0.446
Lfee_1723
Two component sensor and regulator histidine kinase response regulator.
   
 
  0.427
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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