Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ydfG_2Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (238 aa)    
Predicted Functional Partners:
phaB_2
Acetyoacetyl CoA reductase.
  
 
   0.772
tycC_2
Peptide synthetase, non-ribosomal.
  
 
 0.735
Lfee_2374
Acetyltransferase.
  
 0.701
pksJ
Polyketide synthase module.
   
 0.676
tycC_1
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.640
grsB
Non-ribosomal peptide synthetase.
 
 
 0.637
yueD_2
Sepiapterin reductase.
  
 
   0.634
Lfee_1859
Polyketide synthase module.
  
 0.607
bphI
4-hydroxy-2-oxovalerate aldolase.
    
  0.516
csgA
Short chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.487
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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