Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
sacB_1Capsular polysaccharide phosphotransferase cps12A. (349 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase module.
    
 0.720
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.702
rmlA
Glucose-1-phosphate thymidylyltransferase.
  
 0.654
Lfee_1063
Polysaccharide biosynthesis protein.
  
 
 0.618
tycC_2
Peptide synthetase, non-ribosomal.
    
 0.613
Lfee_2374
Acetyltransferase.
    
 0.576
grsB
Non-ribosomal peptide synthetase.
     
 0.520
Lfee_1763
Hypothetical protein.
   
 
 0.465
Lfee_1826
Hypothetical protein.
       0.463
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.451
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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