Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lfee_1862Thiamine biosynthesis protein NMT-1. (320 aa)    
Predicted Functional Partners:
abcT3
ABC transporter ATP binding protein.
  
 0.976
thiD
Bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase.
    
  0.866
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
    
  0.844
pdxH_2
Pyridoxamine 5'-phosphate oxidase.
    
  0.821
pdxH_1
Pyridoxamine 5'-phosphate oxidase.
    
  0.678
yieF
Chromate reductase, Class I, flavoprotein.
  
 
  0.677
Lfee_2006
Carbon starvation induced protein.
  
 
 0.677
Lfee_1639
Nitrogen regulatory protein P-II.
    
 
 0.634
glnK
Carbamoylphosphate synthase large subunit; Belongs to the P(II) protein family.
    
 
 0.634
luxQ_2
Hypothetical protein.
 
  
 0.576
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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