STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1875Serine protein kinase. (643 aa)    
Predicted Functional Partners:
spo
SpoVR family protein.
 
  
 0.993
Lfee_1874
Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family.
 
  
 0.992
ytbE
D-xylose reductase III.
   
    0.780
dps
DNA binding stress protein; Belongs to the Dps family.
   
    0.600
pepN
Aminopeptidase.
       0.544
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.541
Lfee_0394
Cell filamentation protein Fic.
   
    0.535
hchA
Intracellular protease/amidase.
   
    0.531
phoH
Phosphate starvation inducible protein PhnH.
   
  
 0.516
Lfee_1324
OsmC-like protein.
   
    0.478
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.