Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_0172 | yhiP | Lfee_0172 | Lfee_1879 | Amino acid permease. | POT family transporter peptide transport protein. | 0.465 |
Lfee_1878 | yhiP | Lfee_1878 | Lfee_1879 | Alpha-beta hydrolase family transporter esterase. | POT family transporter peptide transport protein. | 0.467 |
Lfee_1880 | yhiP | Lfee_1880 | Lfee_1879 | Uridine kinase. | POT family transporter peptide transport protein. | 0.788 |
gltT_1 | yhiP | Lfee_0459 | Lfee_1879 | Sodium:dicarboxylate symporter protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | POT family transporter peptide transport protein. | 0.406 |
yhiP | Lfee_0172 | Lfee_1879 | Lfee_0172 | POT family transporter peptide transport protein. | Amino acid permease. | 0.465 |
yhiP | Lfee_1878 | Lfee_1879 | Lfee_1878 | POT family transporter peptide transport protein. | Alpha-beta hydrolase family transporter esterase. | 0.467 |
yhiP | Lfee_1880 | Lfee_1879 | Lfee_1880 | POT family transporter peptide transport protein. | Uridine kinase. | 0.788 |
yhiP | gltT_1 | Lfee_1879 | Lfee_0459 | POT family transporter peptide transport protein. | Sodium:dicarboxylate symporter protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.406 |