STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_1930Ankyrin repeat-containing protein. (461 aa)    
Predicted Functional Partners:
Lfee_2483
SET domain protein.
  
 
  0.815
Lfee_3046
Ankyrin repeats (3 copies).
  
     0.764
Lfee_0449
Ankyrin repeat protein.
  
     0.721
Lfee_0671
RasGEF domain protein.
  
     0.712
Lfee_2357
Interaptin.
  
     0.659
Lfee_0169
Glutamine ABC transporter periplasmic protein.
  
     0.624
Lfee_0818
Tubulin-tyrosine ligase family protein.
  
     0.620
arp
Ankyrin repeat domain-containing protein.
  
     0.606
yrrB
Methyltransferase.
  
 
  0.595
Lfee_1678
Methyltransferase.
  
 
  0.564
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.