STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrA_2Membrane-fusion protein AcrA. (382 aa)    
Predicted Functional Partners:
tolC_1
Outer membrane efflux protein.
 
  0.968
Lfee_1990
ABC transporter permease.
 
 
 0.964
Lfee_1991
Fused transporter subunits of ABC superfamily: ATP-binding component.
 
   0.895
tolC_2
Outer membrane protein TolC.
 
 0.728
Lfee_0540
Ankyrin repeats (3 copies).
  
     0.675
czcA_2
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.669
Lfee_0745
Hypothetical protein.
  
     0.668
iraA_1
Small-molecule methyltransferase IraA.
  
     0.660
helA
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.654
Lfee_0306
Hypothetical protein.
  
     0.651
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.