Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lfee_0200 | Lfee_0306 | Lfee_0200 | Lfee_0306 | Coiled-coil protein. | Hypothetical protein. | 0.655 |
Lfee_0200 | Lfee_0557 | Lfee_0200 | Lfee_0557 | Coiled-coil protein. | Hypothetical protein. | 0.528 |
Lfee_0200 | Lfee_1201 | Lfee_0200 | Lfee_1201 | Coiled-coil protein. | Ankyrin repeat protein. | 0.433 |
Lfee_0200 | Lfee_1348 | Lfee_0200 | Lfee_1348 | Coiled-coil protein. | L-gulono-gamma-lactone oxidase. | 0.627 |
Lfee_0200 | Lfee_1994 | Lfee_0200 | Lfee_1994 | Coiled-coil protein. | Protein with a bacterial immunoglobulin-like domain protein. | 0.711 |
Lfee_0200 | Lfee_3024 | Lfee_0200 | Lfee_3024 | Coiled-coil protein. | Hypothetical protein. | 0.678 |
Lfee_0200 | iraA_1 | Lfee_0200 | Lfee_1084 | Coiled-coil protein. | Small-molecule methyltransferase IraA. | 0.545 |
Lfee_0306 | Lfee_0200 | Lfee_0306 | Lfee_0200 | Hypothetical protein. | Coiled-coil protein. | 0.655 |
Lfee_0306 | Lfee_0540 | Lfee_0306 | Lfee_0540 | Hypothetical protein. | Ankyrin repeats (3 copies). | 0.774 |
Lfee_0306 | Lfee_0557 | Lfee_0306 | Lfee_0557 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Lfee_0306 | Lfee_1201 | Lfee_0306 | Lfee_1201 | Hypothetical protein. | Ankyrin repeat protein. | 0.747 |
Lfee_0306 | Lfee_1348 | Lfee_0306 | Lfee_1348 | Hypothetical protein. | L-gulono-gamma-lactone oxidase. | 0.771 |
Lfee_0306 | Lfee_1994 | Lfee_0306 | Lfee_1994 | Hypothetical protein. | Protein with a bacterial immunoglobulin-like domain protein. | 0.759 |
Lfee_0306 | Lfee_3024 | Lfee_0306 | Lfee_3024 | Hypothetical protein. | Hypothetical protein. | 0.766 |
Lfee_0306 | iraA_1 | Lfee_0306 | Lfee_1084 | Hypothetical protein. | Small-molecule methyltransferase IraA. | 0.774 |
Lfee_0306 | lepB_2 | Lfee_0306 | Lfee_3267 | Hypothetical protein. | Effector protein B, substrate of the Dot/Icm secretion system. | 0.774 |
Lfee_0306 | tolC_1 | Lfee_0306 | Lfee_1993 | Hypothetical protein. | Outer membrane efflux protein. | 0.769 |
Lfee_0540 | Lfee_0306 | Lfee_0540 | Lfee_0306 | Ankyrin repeats (3 copies). | Hypothetical protein. | 0.774 |
Lfee_0540 | Lfee_0557 | Lfee_0540 | Lfee_0557 | Ankyrin repeats (3 copies). | Hypothetical protein. | 0.773 |
Lfee_0540 | Lfee_1201 | Lfee_0540 | Lfee_1201 | Ankyrin repeats (3 copies). | Ankyrin repeat protein. | 0.741 |
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