STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2006Carbon starvation induced protein. (264 aa)    
Predicted Functional Partners:
iolS
Aldo/keto reductase.
     
 0.791
Lfee_2004
EamA-like transporter family protein.
       0.768
Lfee_2005
Hypothetical protein.
       0.768
Lfee_2398
Serine carboxypeptidase.
  
 
 0.748
Lfee_1862
Thiamine biosynthesis protein NMT-1.
  
 
  0.719
abcT3
ABC transporter ATP binding protein.
  
 
  0.673
ndoR
Xylene monooxygenase.
   
 
  0.665
gabT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.620
Lfee_2453
Glycosyl hydrolase family 76.
  
     0.613
Lfee_0804
Phosphoadenosine phosphosulfate reductase family protein.
     
 0.598
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.