Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
abcTFused transporter subunits of ABC superfamily: ATP-binding component. (594 aa)    
Predicted Functional Partners:
Lfee_2374
Acetyltransferase.
   
 0.818
pksJ
Polyketide synthase module.
  
 0.768
uup_1
ABC transporter ATP-binding protein Uup.
 
 
   0.655
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.629
aas_2
2-acylglycerophosphoethanolamine acyltransferase.
   
 0.548
aas_1
2-acylglycerophosphoethanolamine acyltransferase.
   
 0.548
tycC_2
Peptide synthetase, non-ribosomal.
  
 
 0.536
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
   0.517
hlyB_1
ABC transporter.
  
 
 
0.514
hlyB_2
ABC transporter.
  
 
 
0.501
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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