Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lfee_2063Ion channel. (238 aa)    
Predicted Functional Partners:
Lfee_2064
Hypothetical protein.
       0.526
Lfee_2065
Hypothetical protein.
       0.524
Lfee_2066
Recombinase B.
       0.524
Lfee_2067
NAD-dependent epimerase/dehydratase.
  
    0.516
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.513
Lfee_2068
Nucleoside-diphosphate sugar epimerase.
  
    0.513
Lfee_1409
Hypothetical protein.
  
     0.491
Lfee_3268
Hypothetical protein.
  
     0.478
Lfee_0046
Carbohydrate-selective porin, OprB family.
  
     0.477
Lfee_1936
GNAT family acetyltransferase.
  
     0.456
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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