STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Lfee_2072Metal-sulfur cluster biosynthetic enzyme. (111 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
 
    0.972
sufC
ATP transporter ATP- binding protein.
 
  
 0.963
sufD
ABC transporter permease.
 
   
 0.957
sufB
Cysteine desulfurase.
 
   
 0.953
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.931
poxA
lysyl-tRNA synthetase.
       0.860
cymR
Rrf2 family transporter protein.
     
 0.793
nifU_2
NifU-like protein.
  
    0.780
ndoR
Xylene monooxygenase.
  
 
 0.641
fpr
Phenol hydroxylase.
  
 
 0.605
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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