STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufDABC transporter permease. (423 aa)    
Predicted Functional Partners:
sufC
ATP transporter ATP- binding protein.
 
 
 0.999
sufB
Cysteine desulfurase.
 
 
0.999
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.990
nifU
Nitrogen fixation protein NifU.
 
  
 0.963
Lfee_2072
Metal-sulfur cluster biosynthetic enzyme.
 
   
 0.938
sufS_2
Aminotransferase class V.
 
 
 0.867
cymR
Rrf2 family transporter protein.
 
   
 0.822
poxA
lysyl-tRNA synthetase.
       0.800
nifU_2
NifU-like protein.
  
  
 0.771
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.685
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.