Lfee_2082 protein (Legionella feeleii) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Lfee_2082

Membrane protein. (253 aa)

Predicted Functional Partners:

lptG

0.800

lptF

0.800

holC

0.551

pepA-2

0.517

carB_3

0.479

greA

0.462

Your Current Organism:

Legionella feeleii

NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lfee_2082	carB_3	Lfee_2082	Lfee_2081	Membrane protein.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.479
Lfee_2082	greA	Lfee_2082	Lfee_2080	Membrane protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.462
Lfee_2082	holC	Lfee_2082	Lfee_2086	Membrane protein.	DNA polymerase III subunit chi.	0.551
Lfee_2082	lptF	Lfee_2082	Lfee_2084	Membrane protein.	Hypothetical protein.	0.800
Lfee_2082	lptG	Lfee_2082	Lfee_2083	Membrane protein.	Hypothetical protein.	0.800
Lfee_2082	pepA-2	Lfee_2082	Lfee_2085	Membrane protein.	Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.517
carB_3	Lfee_2082	Lfee_2081	Lfee_2082	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Membrane protein.	0.479
carB_3	greA	Lfee_2081	Lfee_2080	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.819
carB_3	lptF	Lfee_2081	Lfee_2084	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Hypothetical protein.	0.479
carB_3	lptG	Lfee_2081	Lfee_2083	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	Hypothetical protein.	0.479
greA	Lfee_2082	Lfee_2080	Lfee_2082	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Membrane protein.	0.462
greA	carB_3	Lfee_2080	Lfee_2081	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.819
greA	lptF	Lfee_2080	Lfee_2084	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.475
greA	lptG	Lfee_2080	Lfee_2083	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.468
holC	Lfee_2082	Lfee_2086	Lfee_2082	DNA polymerase III subunit chi.	Membrane protein.	0.551
holC	lptF	Lfee_2086	Lfee_2084	DNA polymerase III subunit chi.	Hypothetical protein.	0.659
holC	lptG	Lfee_2086	Lfee_2083	DNA polymerase III subunit chi.	Hypothetical protein.	0.619
holC	pepA-2	Lfee_2086	Lfee_2085	DNA polymerase III subunit chi.	Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.844
lptF	Lfee_2082	Lfee_2084	Lfee_2082	Hypothetical protein.	Membrane protein.	0.800
lptF	carB_3	Lfee_2084	Lfee_2081	Hypothetical protein.	Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.	0.479