Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lfee_2103 | Lfee_2104 | Lfee_2103 | Lfee_2104 | Hypothetical protein. | Hypothetical protein. | 0.580 |
| Lfee_2103 | atpA | Lfee_2103 | Lfee_1799 | Hypothetical protein. | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.679 |
| Lfee_2103 | atpD | Lfee_2103 | Lfee_1797 | Hypothetical protein. | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.475 |
| Lfee_2103 | atpG | Lfee_2103 | Lfee_1798 | Hypothetical protein. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.543 |
| Lfee_2103 | fadH | Lfee_2103 | Lfee_2121 | Hypothetical protein. | 2,4-dienoyl-CoA reductase FadH1. | 0.710 |
| Lfee_2103 | pksJ | Lfee_2103 | Lfee_0647 | Hypothetical protein. | Polyketide synthase module. | 0.473 |
| Lfee_2103 | rplQ | Lfee_2103 | Lfee_2447 | Hypothetical protein. | 50S ribosomal protein L17. | 0.473 |
| Lfee_2103 | rplS | Lfee_2103 | Lfee_0695 | Hypothetical protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.470 |
| Lfee_2103 | rpmF | Lfee_2103 | Lfee_0713 | Hypothetical protein. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.470 |
| Lfee_2103 | rpsP | Lfee_2103 | Lfee_0698 | Hypothetical protein. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.470 |
| Lfee_2104 | Lfee_2103 | Lfee_2104 | Lfee_2103 | Hypothetical protein. | Hypothetical protein. | 0.580 |
| atpA | Lfee_2103 | Lfee_1799 | Lfee_2103 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein. | 0.679 |
| atpA | atpD | Lfee_1799 | Lfee_1797 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpG | Lfee_1799 | Lfee_1798 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | pksJ | Lfee_1799 | Lfee_0647 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Polyketide synthase module. | 0.478 |
| atpA | rplQ | Lfee_1799 | Lfee_2447 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 50S ribosomal protein L17. | 0.839 |
| atpD | Lfee_2103 | Lfee_1797 | Lfee_2103 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Hypothetical protein. | 0.475 |
| atpD | atpA | Lfee_1797 | Lfee_1799 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpD | atpG | Lfee_1797 | Lfee_1798 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP synthase F0F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpD | pksJ | Lfee_1797 | Lfee_0647 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Polyketide synthase module. | 0.443 |
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