STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2146Copper efflux ATPase. (998 aa)    
Predicted Functional Partners:
pacS
Heavy metal transporting P-type ATPase.
 
 
0.930
actP_1
Cation transport ATPase.
  
     0.742
dotA
Defect in organelle trafficking protein DotA.
  
     0.579
Lfee_1773
Putative helicase/relaxase.
  
     0.573
Lfee_0606
Putative membrane protein YdgA-like protein.
  
     0.567
spkB_3
Protein IcmE (DotG).
  
     0.521
Lfee_0384
Ectonucleoside triphosphate diphosphohydrolase I.
  
     0.516
Lfee_2147
Sporulation domain-containing protein.
 
     0.497
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.489
Lfee_2902
Putative virulence protein.
  
     0.453
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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