STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2192Signal peptide protein. (96 aa)    
Predicted Functional Partners:
Lfee_2351
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.961
Lfee_2352
Hypothetical protein.
 
  
 0.915
cloSI
Clostripain precursor.
   
    0.799
ycel
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.649
cybA
Cytochrome b561 transmembrane protein.
       0.645
yceI_1
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.645
Lfee_2291
Protein IcmB (DotO).
  
    0.629
virB4
Type IV secretory protein VirB4.
   
    0.602
spkB_3
Protein IcmE (DotG).
   
    0.570
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
    0.557
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.