STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2223Hypothetical protein. (367 aa)    
Predicted Functional Partners:
hlyB_1
ABC transporter.
 
     0.784
cvaA
Hemolysin D.
 
     0.700
Lfee_2224
Hypothetical protein.
       0.580
Lfee_0317
Methyltransferase domain protein.
  
     0.556
Lfee_2225
Hypothetical protein.
       0.527
Lfee_2228
HTH-type transcriptional regulator.
 
     0.501
Lfee_2226
Hypothetical protein.
 
    
0.497
Lfee_1812
Metalloproteinase-like protein.
  
     0.415
Lfee_2227
Hypothetical protein.
       0.408
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.