STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpE_2Beta-lactamase. (516 aa)    
Predicted Functional Partners:
ampH
AMPC cephalosporinase.
  
     0.654
Lfee_0011
Putative secreted esterase.
  
     0.606
Lfee_2231
CAAX amino terminal protease family protein.
       0.570
chiA1
Chitinase A1 precursor.
  
  
  0.560
chiD
Chitinase.
  
  
  0.518
pksJ
Polyketide synthase module.
  
  
 0.509
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.454
Lfee_2233
Hypothetical protein.
 
     0.428
Lfee_2851
BNR/Asp-box repeat containing protein.
  
     0.421
pacS
Heavy metal transporting P-type ATPase.
       0.402
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.