Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arpAnkyrin repeat domain-containing protein. (473 aa)    
Predicted Functional Partners:
Lfee_2251
Putative Smr domain protein.
   
 0.889
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
   0.855
Lfee_2306
IcmT protein.
  
 
   0.794
Lfee_2302
IcmP protein.
  
   
 0.786
dotA
Defect in organelle trafficking protein DotA.
  
 
   0.782
enhA_2
Enhanced entry protein EnhA.
  
     0.772
Lfee_2292
IcmJ protein.
  
     0.772
enhA_4
Enhanced entry protein EnhA.
  
     0.771
enhA_3
Enhanced entry protein EnhA.
  
     0.770
Lfee_3143
Enhanced entry protein EnhA.
  
     0.770
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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