STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lfee_2291Protein IcmB (DotO). (1007 aa)    
Predicted Functional Partners:
spkB_3
Protein IcmE (DotG).
 
 0.989
Lfee_2292
IcmJ protein.
 
     0.941
Lfee_2298
Protein IcmL (DotI).
 
   
 0.928
Lfee_2297
IcmK protein.
 
   
 0.924
Lfee_2302
IcmP protein.
 
   
 0.923
Lfee_2301
Protein IcmO (DotL).
 
  
 0.865
Lfee_2306
IcmT protein.
 
 
 
 0.829
dotC
Defect in organelle trafficking lipoprotein DotC.
  
   
 0.825
enhA_2
Enhanced entry protein EnhA.
  
     0.736
Lfee_0576
HTH-type transcriptional regulator.
 
     0.724
Your Current Organism:
Legionella feeleii
NCBI taxonomy Id: 453
Other names: ATCC 35072, CCUG 16417, CIP 103877, DSM 17645, L. feeleii, NCTC 12022, strain WO-44C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.